- deephyper.skopt.optimizer.gbrt.base_minimize(func, dimensions, base_estimator, n_calls=100, n_random_starts=None, n_initial_points=10, initial_point_generator='random', acq_func='EI', acq_optimizer='lbfgs', x0=None, y0=None, random_state=None, verbose=False, callback=None, n_points=10000, n_restarts_optimizer=5, xi=0.01, kappa=1.96, n_jobs=1, model_queue_size=None)#
Base optimizer class
func (callable) –
Function to minimize. Should take a single list of parameters and return the objective value.
If you have a search-space where all dimensions have names, then you can use
deephyper.skopt.utils.use_named_args()as a decorator on your objective function, in order to call it directly with the named arguments. See use_named_args for an example.
dimensions (list, shape (n_dims,)) –
List of search space dimensions. Each search dimension can be defined either as
a (lower_bound, upper_bound) tuple (for Real or Integer dimensions),
a (lower_bound, upper_bound, “prior”) tuple (for Real dimensions),
as a list of categories (for Categorical dimensions), or
an instance of a Dimension object (Real, Integer or Categorical).
The upper and lower bounds are inclusive for Integer dimensions.
base_estimator (sklearn regressor) – Should inherit from sklearn.base.RegressorMixin. In addition, should have an optional return_std argument, which returns std(Y | x) along with E[Y | x].
n_calls (int, default: 100) – Maximum number of calls to func. An objective function will always be evaluated this number of times; Various options to supply initialization points do not affect this value.
n_random_starts (int, default: None) –
Number of evaluations of func with random points before approximating it with base_estimator.
Deprecated since version 0.8: use n_initial_points instead.
n_initial_points (int, default: 10) – Number of evaluations of func with initialization points before approximating it with base_estimator. Initial point generator can be changed by setting initial_point_generator.
initial_point_generator (str, InitialPointGenerator instance, default: “random”) –
Sets a initial points generator. Can be either
”random” for uniform random numbers,
”sobol” for a Sobol’ sequence,
”halton” for a Halton sequence,
”hammersly” for a Hammersly sequence,
”lhs” for a latin hypercube sequence,
”grid” for a uniform grid sequence
acq_func (string, default: “EI”) –
Function to minimize over the posterior distribution. Can be either
”LCB” for lower confidence bound,
”EI” for negative expected improvement,
”PI” for negative probability of improvement.
”EIps” for negated expected improvement per second to take into account the function compute time. Then, the objective function is assumed to return two values, the first being the objective value and the second being the time taken in seconds.
”PIps” for negated probability of improvement per second. The return type of the objective function is assumed to be similar to that of “EIps”
acq_optimizer (string, “sampling” or “lbfgs”, default: “lbfgs”) –
Method to minimize the acquisition function. The fit model is updated with the optimal value obtained by optimizing acq_func with acq_optimizer.
If set to “sampling”, then acq_func is optimized by computing acq_func at n_points randomly sampled points and the smallest value found is used.
If set to “lbfgs”, then
The n_restarts_optimizer no. of points which the acquisition function is least are taken as start points.
”lbfgs” is run for 20 iterations with these points as initial points to find local minima.
The optimal of these local minima is used to update the prior.
x0 (list, list of lists or None) –
Initial input points.
If it is a list of lists, use it as a list of input points. If no corresponding outputs y0 are supplied, then len(x0) of total calls to the objective function will be spent evaluating the points in x0. If the corresponding outputs are provided, then they will be used together with evaluated points during a run of the algorithm to construct a surrogate.
If it is a list, use it as a single initial input point. The algorithm will spend 1 call to evaluate the initial point, if the outputs are not provided.
If it is None, no initial input points are used.
y0 (list, scalar or None) –
Objective values at initial input points.
If it is a list, then it corresponds to evaluations of the function at each element of x0 : the i-th element of y0 corresponds to the function evaluated at the i-th element of x0.
If it is a scalar, then it corresponds to the evaluation of the function at x0.
If it is None and x0 is provided, then the function is evaluated at each element of x0.
random_state (int, RandomState instance, or None (default)) – Set random state to something other than None for reproducible results.
verbose (boolean, default: False) – Control the verbosity. It is advised to set the verbosity to True for long optimization runs.
callback (callable, list of callables, optional) – If callable then callback(res) is called after each call to func. If list of callables, then each callable in the list is called.
n_points (int, default: 10000) – If acq_optimizer is set to “sampling”, then acq_func is optimized by computing acq_func at n_points randomly sampled points.
n_restarts_optimizer (int, default: 5) – The number of restarts of the optimizer when acq_optimizer is “lbfgs”.
xi (float, default: 0.01) – Controls how much improvement one wants over the previous best values. Used when the acquisition is either “EI” or “PI”.
kappa (float, default: 1.96) – Controls how much of the variance in the predicted values should be taken into account. If set to be very high, then we are favouring exploration over exploitation and vice versa. Used when the acquisition is “LCB”.
n_jobs (int, default: 1) – Number of cores to run in parallel while running the lbfgs optimizations over the acquisition function and given to the base_estimator. Valid only when acq_optimizer is set to “lbfgs”. or when the base_estimator supports n_jobs as parameter and was given as string. Defaults to 1 core. If n_jobs=-1, then number of jobs is set to number of cores.
model_queue_size (int or None, default: None) – Keeps list of models only as long as the argument given. In the case of None, the list has no capped length.
res – The optimization result returned as a OptimizeResult object. Important attributes are:
x [list]: location of the minimum.
fun [float]: function value at the minimum.
models: surrogate models used for each iteration.
x_iters [list of lists]: location of function evaluation for each iteration.
func_vals [array]: function value for each iteration.
space [Space]: the optimization space.
specs [dict]`: the call specifications.
rng [RandomState instance]: State of the random state at the end of minimization.
For more details related to the OptimizeResult object, refer http://docs.scipy.org/doc/scipy/reference/generated/scipy.optimize.OptimizeResult.html
- Return type:
OptimizeResult, scipy object